SELECT 
  cscart_multi_decproduct_prices.product_id, 
  MIN(
    IF(
      cscart_multi_decproduct_prices.percentage_discount = 0, 
      cscart_multi_decproduct_prices.price, 
      cscart_multi_decproduct_prices.price - (
        cscart_multi_decproduct_prices.price * cscart_multi_decproduct_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_multi_decproduct_prices 
WHERE 
  cscart_multi_decproduct_prices.product_id IN (
    12, 126, 282, 280, 278, 1, 78, 248, 23, 
    15, 130, 149
  ) 
  AND cscart_multi_decproduct_prices.lower_limit = 1 
  AND cscart_multi_decproduct_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_multi_decproduct_prices.product_id

Query time 0.00051

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "48.41"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_multi_decproduct_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 26,
        "rows_produced_per_join": 4,
        "filtered": "18.50",
        "index_condition": "(`vishalecarter_multi_dec`.`cscart_multi_decproduct_prices`.`product_id` in (12,126,282,280,278,1,78,248,23,15,130,149))",
        "cost_info": {
          "read_cost": "47.45",
          "eval_cost": "0.96",
          "prefix_cost": "48.41",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`vishalecarter_multi_dec`.`cscart_multi_decproduct_prices`.`lower_limit` = 1) and (`vishalecarter_multi_dec`.`cscart_multi_decproduct_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
1 5399.99000000
12 30.60000000
15 150.00000000
23 599.99000000
78 100.00000000
126 129.99000000
130 49.95000000
149 53.99000000
248 372.27000000
278 75.00000000
280 50.00000000
282 75.00000000